t-SNE Plot

With simple one button configuration of t-SNE plots it's fast and efficient to analyze for instance single cell RNA-seq data.

Qlucore Omics Explorer is a D.I.Y next-generation bioinformatics software for research in life science, plant- and biotech industries, as well as academia. The powerful visualization-based data analysis tool with inbuilt powerful statistics delivers immediate results and provides instant exploration and visualization of big data.

t-sne plot

USE t-SNE PLOTS TO IDENTIFY STRUCTURES

The t-SNE plot support is complete and versatile. With direct access to the perplexity parameter and full integration with other plot types, the t-SNE plot complements other tools such as PCA plots and ISOMAP. The rich suite of tools aids you in even more advanced searches for structure and patterns.

SINGLE CELL RNA-SEQ MADE EASY 

Qlucore Omics Explorer supports a complete workflow for single cell RNA-seq data, where the t-SNE plot is one of the components. Other useful functions are PCA plots, kNN clustering and subsampling as well as variable pre-filtering. 

Click here to learn more about single cell RNA-seq. 

Easy Data Import

Qlucore Omics Explorer supports many data file formats. Import can be done in several ways, with or without normalization. 

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