Use NDEx Integrated Query together with Qlucore Omics Explorer

Are you looking for enhanced biological network-based gene set interpretation? Use NDEx Integrated Query together with Qlucore Omics Explorer to go deeper into the functional analysis of RNA-seq. Networks are a great tool for discovery and prediction, especially when exploring complex processes and diseases where differential gene expression analysis is not providing results.

During the demonstration of Qlucore Omics Explorer, with in built GSEA workbench, the work and output will be combined with analysis in NDEx/Cytoscape. We will find differentially expressed genes, enriched pathways in GSEA and we will take one pathway into NDEx/Cytoscape to find matches and to build biological networks with pathway figures. We will use a public RNA-seq dataset from GREIN database.