This new release includes an extensive upgrade to the software, adding features in several different areas to strengthen the analysis support even further.
Now it is possible to perform peak analysis for comprehensive analysis of peak data such as ChIP-seq and ATAC-seq with the NGS module in Qlucore Omics Explorer to reveal biological insights on a genome wide scale. Other important additional features to in the new release are enhancements to the genome browser and a totally new biomarker workbench coupled with an upgraded statistical framework.
Figure: Genome Browser with ChIP-seq sample.
With the updated genome browser, it is now possible to visualize gene fusions in their genetic context. You can also easily label, color and order sample annotations in two levels and you quickly add variables to a list with the mouse tool.
The totally new Biomarker workbench is optimized for experiments and studies in the areas of drug development and biomarker discovery. You can for example run multiple jobs of statistical tests (in batch mode) on many annotations with different conditions.
Qlucore Omics Explorer 3.7 includes the following news
ChIP-seq and ATAC-seq full workflow support.
A new 2D plot, Pie chart – making it possible to visualize the distribution of samples.
Totally new Biomarker workbench optimized for experiments and studies in the areas of drug development and biomarker discovery.
Restriction support when setting up statistical tests.
Easy support for Two-way ANOVA, test the combination effect of two sample annotations.
Extensive updates to the genome browser i.e. now possible to label, color and order sample annotations in two levels and adding variables to a list with the mouse tool function variable list tool.
Fusion gene visualization in the genome browser with in-depth information about breakpoints and full sequence.
Box plots updates, now possible to display a group of variables for each box.
New color palette, including option to select color based on the annotation group name.
Watch video and learn more
"Introduction to new functionalities in Qlucore Omics Explorer 3.7"